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    Home » Muffins

    Healthy Chocolate Beet Muffins (Paleo, Gluten Free)

    Published: Nov 29, 2022 · by Katie

    Jump to Recipe·Print Recipe

    These healthy chocolate beet muffins are made with cooked beets, almond butter and eggs and sweetened with coconut sugar. This beet muffin recipe is perfect for breakfast or packing in lunches. They're gluten free, dairy free and paleo friendly.

    Top down view of chocolate beet muffins.

    If you're not sure how beets would taste in a muffin, then you MUST try these chocolate beet muffins.

    They're fudgy and rich, with a moist crumb texture and you cannot taste the beets. Honestly, they're like mini chocolate cakes, but without all the excess sugar and with some nutritional value thanks to the beets.

    And yes, these beet muffins are kid friendly! All three of my children love these muffins in terms of taste and texture.

    Why You'll Love these Healthy Chocolate Beet Muffins

    • Paleo friendly - made with real, whole food ingredients
    • Flourless - gluten free and grain free
    • No refined sugar - sweetened with coconut sugar (or granulated monk fruit sweetener for low carb)
    • dairy free - no milk, no butter
    Bite of a muffin to show the texture.

    Ingredients

    Here's a list of what you'll need to make these paleo beet muffins:

    • cooked beets - You can purchase pre-cooked beets for this recipe, or cook your own. To cook your own, wash the beets, cut them into bite-sized pieces and then steam them in a steamer pot until tender. You'll want to let the beets cool to room temperature before making the muffins.
    • almond butter - My goal was to make these flourless chocolate beet muffins, so they contain almond butter. Any other nut or seed butter should work, but almond butter has a very neutral flavor, so I recommend that for best results.
    • eggs - to bind the ingredients. Since these muffins are flourless, using an egg replacement will not work well.
    • avocado oil - or any neutral flavored oil
    • vanilla extract - for flavor
    • cacao powder - you can swap this with cocoa powder if you prefer
    • coconut sugar - to sweeten the muffins.
    • baking powder - I make my own paleo baking powder, but any type will do.
    • baking soda - for extra fluff
    • salt - enhances the flavors
    • dark chocolate chips - optional mix in
    Ingredients needed to make healthy chocolate beet muffins.

    How to Make Paleo Chocolate Beet Muffins

    You'll need a food processor or high powered blender to make these chocolate beet muffins. Here are the steps:

    1. First, preheat your oven to 350 degrees F. Line a muffin tin with paper or silicone muffins liners. Please note, silicone liners work better for this recipe. Paper liners stick a little to the muffins until they have been chilled in the fridge.
    Wet ingredients in food processor.
    1. Add the wet muffin ingredients to your food processor and blend until smooth.
    Adding the dry ingredients to the blended wet ingredients.
    1. Add the dry ingredients and blend.
    Adding the chocolate chips to the blended muffin ingredients.
    1. Add the chocolate chips and pulse them into the batter.
    Batter in lined muffin pan.
    1. Scoop the batter into your lined muffin tin, filling each slot about ¾ full.
    1. Place the muffins in your preheated oven and bake at 350 degrees for 20-22 minutes.
    2. After baking, cool the muffins for a few minutes in the pan, then transfer them to a wire cooling rack.
    Top down view of beet muffins on wire cooling rack.

    Storage

    These flourless chocolate beet muffins are best stored in an air-tight container in the fridge, for up to one week.

    More Paleo Beet Recipes

    Looking for more paleo recipes using beets? Check these out:

    • Slice of chocolate beet cake.
      Healthy Beetroot Cake (Gluten Free, Paleo)
    • Beet Crackers (Gluten Free)
    • pineapple beet smoothie topped with bee pollen and shredded coconut
      Pineapple Beet Smoothie (No Banana)
    • Chocolate Beet loaf.
      Chocolate Beet Loaf (Gluten Free, Paleo)
    Print
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    Top down view of chocolate beet muffins.

    Healthy Chocolate Beet Muffins (Paleo, Gluten Free)

    5 Stars 4 Stars 3 Stars 2 Stars 1 Star 5 from 5 reviews
    • Author: Katie
    • Prep Time: 10 minutes
    • Cook Time: 20 minutes
    • Total Time: 30 minutes
    • Yield: 10 muffins 1x
    Print Recipe
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    Description

    These healthy chocolate beet muffins are made with cooked beets and sweetened with coconut sugar.  They are flourless, gluten free, dairy free and paleo friendly.


    Ingredients

    Scale
    • 1 cup cooked beets (170g)*
    • ½ cup almond butter
    • 2 large eggs
    • 2 Tbsp avocado oil
    • 1 tsp vanilla extract
    • ½ cup cacao powder (40g)
    • ¼ cup coconut sugar (40g)
    • 1 tsp baking powder
    • ¼ tsp baking soda
    • ¼ tsp salt
    • ⅓ cup dark chocolate chips (optional)

    Instructions

    1. Preheat your oven to 350 degrees F and line a muffin pan with paper or silicone muffins liners**

    2. Add the wet muffin ingredients to a food processor or high powered blender.  This includes the beets, almond butter, eggs, avocado oil and vanilla.  Blend until smooth.

    3. Add in the dry ingredients.  This includes the cacao powder, coconut sugar, baking powder, baking soda and salt.  Blend until well combined.

    4. Add in the chocolate chips and pulse the batter a few times to combine.
    5. Scoop the batter into your lined muffin pan, filling each slot about ¾ full. You should get about 10 muffins.

    6. Place the muffins in your preheated oven and bake at 350 degrees for 20-22 minutes.

    7. After baking, cool the muffins for a few minutes in the pan, then transfer them to a wire cooling rack


    Notes

    *You can use pre-cooked beets, or steam your own for this recipe.  To steam your own beets, rinse the beets, cut off the stems and then cut the beets into bite-sized pieces.  Place the beets in a steamer pot and steam until tender.  Let the beets cool to room temperature before using.

    **Please note, silicone liners work better for this recipe. Paper liners stick a little to the muffins until they have been chilled in the fridge.

    Did you make this recipe?

    Share a photo and tag me — I can't wait to see what you've made!

    pinterest image for chocolate beet muffins
    « Healthy Cauliflower Mashed Potatoes (Paleo, Vegan)
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    Reader Interactions

    Comments

    1. Katie

      February 22, 2023 at 12:40 pm

      My family and I love these beet muffins! Enjoy!

      Reply
    2. Danielle

      September 11, 2023 at 2:56 pm

      These muffins don’t last long around my house. They are so delicious my three year old requested them for her birthday dessert! I’ve made them a few times; one time I slightly over baked and they turned out very dry so just keep a close eye on them.

      Reply
      • Katie

        September 13, 2023 at 10:26 am

        Love that she asked to have them as her birthday dessert - so cute!

        Reply
    3. Morgan R

      March 06, 2024 at 10:14 am

      These were great! Used 137 g beets and it still worked. Didn't stick to the paper liners either, yay! I used monk sugar.

      Reply
      • Katie

        March 06, 2024 at 1:08 pm

        So glad they turned out for you 🙂

        Reply
    4. Susan

      March 10, 2024 at 8:33 pm

      I make these a lot! They always turn out great - texture, flavor, richness. Thank you much. 🙂

      Reply
      • Katie

        March 11, 2024 at 7:38 am

        I'm so glad you enjoy them 🙂

        Reply
    5. Drewzilla

      October 08, 2025 at 9:18 pm

      Delicious! These were tasty enough that my kids still ate them even after I told them there were beets in them! I loved the smooth, light texture (so many healthy things I make end up gritty—these are not gritty at all!). Thanks for the recipe.

      Reply
      • Katie

        October 09, 2025 at 7:49 am

        Oh wonderful! I'm so glad you all enjoyed them - kids can be hard to please but my kiddos love these too 🙂

        Reply
    6. Jerilea

      September 07, 2026 at 7:31 am

      These turned out great. I ended up with 12 muffins. Used home canned beets. Thank you for this recipe!

      Reply
      • Katie

        September 08, 2026 at 3:16 pm

        So glad you liked them! Thank you for leaving a review 🙂

        Reply

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    Hi there!

    I'm Katie and I have a passion for baking healthy treats using real, whole food ingredients. On my blog you'll find a variety of sweet and savory recipes, all gluten free and dairy free. My mission is to make baking nutritious, delicious, simple and family friendly.

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